Chryseobacterium sp. SC28 SC28_48

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. SC28 SC28_48 is characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a relatively simple genomic structure. The accession number for this strain is QOVY00000000.1, which serves as a unique identifier for its genetic material in biological databases. The rod shape of Chryseobacterium sp. SC28 SC28_48 suggests that it may have specific adaptations for growth and survival in its environment, which could include efficient nutrient uptake and mobility. Rod-shaped bacteria are often associated with diverse ecological niches, and the traits of Chryseobacterium species typically enable them to thrive in various habitats, including soil and aquatic environments. Understanding the characteristics of Chryseobacterium sp. SC28 SC28_48 can provide insights into its ecological role, particularly in nutrient cycling and biodegradation processes. As a member of the Chryseobacterium genus, this strain may be involved in the decomposition of organic matter, contributing to soil health and ecosystem dynamics. Further research into its specific metabolic pathways and interactions with other microorganisms could reveal its potential applications in bioremediation and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp. SC28
StrainSC28_48

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium sp. SC28 SC28_48, whole genome shotgun sequence.

Gene Summary

Adenine Count

816328 bp

Thymine Count

816426 bp

Guanine Count

551281 bp

Cytosine Count

551689 bp

Genome Length

2735736 bp

Protein-coding Genes

2457 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDTW91_08165Not AvailablePositive1711160 - 171243147347.4
nudix domain-containing proteinDTW91_08170Not AvailableNegative1712453 - 171306723766.1
srpbcc family proteinDTW91_08175Not AvailablePositive1713105 - 171349114520.6
anhydro-n-acetylmuramic acid kinaseDTW91_08180Not AvailableNegative1713493 - 171454839598.5
lps export abc transporter periplasmic protein lptcDTW91_08185Not AvailableNegative1714549 - 171514222949.8
hypothetical proteinDTW91_08190Not AvailableNegative1715163 - 171643748059.4
dna polymerase iii subunit delta'DTW91_08195Not AvailablePositive1716773 - 171787642464.8
hypothetical proteinDTW91_08200Not AvailablePositive1718126 - 171856317222.9
nad-dependent dna ligase ligaDTW91_08205Not AvailableNegative1718579 - 172058276470.3
glycerophosphodiester phosphodiesteraseDTW91_08210Not AvailablePositive1720672 - 172142128497.5

Displaying genes 1601 – 1610 of 2500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.