PS1 clade bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

The PS1 clade bacterium is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession number QOQD00000000.1, which is crucial for referencing its genomic data in scientific communication and databases. The presence of a single replicon suggests that this bacterium may possess a simpler regulatory mechanism for replication and gene expression, potentially allowing for rapid growth and response to environmental changes. This trait can be advantageous in fluctuating ecological niches, where resource availability may vary. The PS1 clade is part of a larger group of bacteria that often exhibit diverse metabolic capabilities. While specific metabolic pathways and ecological roles of this particular clade are not detailed, the traits associated with single-replicon bacteria generally point towards a capacity for specialized survival strategies, such as efficient nutrient utilization or resilience in challenging conditions. In summary, the PS1 clade bacterium, with its unique genomic structure and single replicon, may possess evolutionary advantages that allow it to thrive in various ecological contexts. Further research could elucidate its specific ecological roles and interactions within microbial communities, enhancing our understanding of its significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: PS1 clade bacterium isolate MED-G57 PS1-MED-G57-C25, whole

Gene Summary

Adenine Count

421421 bp

Thymine Count

428648 bp

Guanine Count

207310 bp

Cytosine Count

214393 bp

Genome Length

1271772 bp

Protein-coding Genes

1280 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyclase family proteinDBW71_00055Not AvailableNegative9358 - 1004425044.9
amidaseDBW71_00060Not AvailableNegative10054 - 1151154431.0
50s ribosomal protein l19DBW71_00065Not AvailablePositive11642 - 1206716002.1
m42 family peptidaseDBW71_00070Not AvailablePositive12101 - 1313838349.2
5s ribosomal rnaNot AvailableNot AvailablePositive13050 - 13164Not Available
3-isopropylmalate dehydratase large subunitDBW71_00075Not AvailablePositive13207 - 1461351131.7
3-isopropylmalate dehydratase small subunitDBW71_00080Not AvailablePositive14624 - 1522922443.9
3-isopropylmalate dehydrogenaseDBW71_00085Not AvailablePositive15272 - 1638140383.5
aspartate-semialdehyde dehydrogenaseDBW71_00090Not AvailablePositive16392 - 1740837317.9
succinate dehydrogenase, cytochrome b556 subunitDBW71_00095Not AvailablePositive17486 - 1787214421.3

Displaying genes 11 – 20 of 1311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.