PS1 clade bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

The PS1 clade bacterium is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession number QOQD00000000.1, which is crucial for referencing its genomic data in scientific communication and databases. The presence of a single replicon suggests that this bacterium may possess a simpler regulatory mechanism for replication and gene expression, potentially allowing for rapid growth and response to environmental changes. This trait can be advantageous in fluctuating ecological niches, where resource availability may vary. The PS1 clade is part of a larger group of bacteria that often exhibit diverse metabolic capabilities. While specific metabolic pathways and ecological roles of this particular clade are not detailed, the traits associated with single-replicon bacteria generally point towards a capacity for specialized survival strategies, such as efficient nutrient utilization or resilience in challenging conditions. In summary, the PS1 clade bacterium, with its unique genomic structure and single replicon, may possess evolutionary advantages that allow it to thrive in various ecological contexts. Further research could elucidate its specific ecological roles and interactions within microbial communities, enhancing our understanding of its significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: PS1 clade bacterium isolate MED-G57 PS1-MED-G57-C25, whole

Gene Summary

Adenine Count

421421 bp

Thymine Count

428648 bp

Guanine Count

207310 bp

Cytosine Count

214393 bp

Genome Length

1271772 bp

Protein-coding Genes

1280 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-oxoprolinaseDBW71_03805Not AvailablePositive719701 - 723258132013.0
homocysteine s-methyltransferase family proteinDBW71_03810Not AvailableNegative723266 - 72419234238.3
vacj family lipoproteinDBW71_03815Not AvailablePositive724452 - 72529731720.1
abc transporter substrate-binding proteinDBW71_03820Not AvailablePositive725311 - 72594024024.8
isocitrate/isopropylmalate dehydrogenase family proteinDBW71_03825Not AvailablePositive725967 - 72703139202.2
coa transferaseDBW71_03830Not AvailableNegative727011 - 72819842996.4
hypothetical proteinDBW71_03835Not AvailableNegative728233 - 72901228972.5
aminopeptidase p family proteinDBW71_03840Not AvailableNegative729112 - 73045850976.7
Trna-metNot AvailableNot AvailablePositive730656 - 730732Not Available
rna polymerase sigma factor rpodDBW71_03850Not AvailableNegative730831 - 73281675843.2

Displaying genes 761 – 770 of 1311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.