PS1 clade bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

The PS1 clade bacterium is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession number QOQD00000000.1, which is crucial for referencing its genomic data in scientific communication and databases. The presence of a single replicon suggests that this bacterium may possess a simpler regulatory mechanism for replication and gene expression, potentially allowing for rapid growth and response to environmental changes. This trait can be advantageous in fluctuating ecological niches, where resource availability may vary. The PS1 clade is part of a larger group of bacteria that often exhibit diverse metabolic capabilities. While specific metabolic pathways and ecological roles of this particular clade are not detailed, the traits associated with single-replicon bacteria generally point towards a capacity for specialized survival strategies, such as efficient nutrient utilization or resilience in challenging conditions. In summary, the PS1 clade bacterium, with its unique genomic structure and single replicon, may possess evolutionary advantages that allow it to thrive in various ecological contexts. Further research could elucidate its specific ecological roles and interactions within microbial communities, enhancing our understanding of its significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: PS1 clade bacterium isolate MED-G57 PS1-MED-G57-C25, whole

Gene Summary

Adenine Count

421421 bp

Thymine Count

428648 bp

Guanine Count

207310 bp

Cytosine Count

214393 bp

Genome Length

1271772 bp

Protein-coding Genes

1280 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylglycinamide formyltransferaseDBW71_02800Not AvailablePositive535482 - 53608722331.2
nad-dependent epimerase/dehydratase family proteinDBW71_02805Not AvailablePositive536091 - 53674424533.2
lyse family translocatorDBW71_02810Not AvailableNegative536894 - 53749322407.2
carboxymuconolactone decarboxylaseDBW71_02815Not AvailableNegative537532 - 53818225451.9
hypothetical proteinDBW71_02820Not AvailableNegative538265 - 53867215394.2
nucleoside-diphosphate kinaseDBW71_02825Not AvailableNegative538769 - 53919115614.6
leucyl aminopeptidaseDBW71_02830Not AvailableNegative539270 - 54074854324.6
lptf/lptg family permeaseDBW71_02835Not AvailablePositive540854 - 54197543183.3
lptf/lptg family permeaseDBW71_02840Not AvailablePositive541959 - 54304741064.7
lps-assembly protein lptdDBW71_02845Not AvailablePositive543047 - 54522783091.0

Displaying genes 561 – 570 of 1311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.