PS1 clade bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

The PS1 clade bacterium is characterized by its single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The bacterium is cataloged under the accession number QOQD00000000.1, which is crucial for referencing its genomic data in scientific communication and databases. The presence of a single replicon suggests that this bacterium may possess a simpler regulatory mechanism for replication and gene expression, potentially allowing for rapid growth and response to environmental changes. This trait can be advantageous in fluctuating ecological niches, where resource availability may vary. The PS1 clade is part of a larger group of bacteria that often exhibit diverse metabolic capabilities. While specific metabolic pathways and ecological roles of this particular clade are not detailed, the traits associated with single-replicon bacteria generally point towards a capacity for specialized survival strategies, such as efficient nutrient utilization or resilience in challenging conditions. In summary, the PS1 clade bacterium, with its unique genomic structure and single replicon, may possess evolutionary advantages that allow it to thrive in various ecological contexts. Further research could elucidate its specific ecological roles and interactions within microbial communities, enhancing our understanding of its significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: PS1 clade bacterium isolate MED-G57 PS1-MED-G57-C25, whole

Gene Summary

Adenine Count

421421 bp

Thymine Count

428648 bp

Guanine Count

207310 bp

Cytosine Count

214393 bp

Genome Length

1271772 bp

Protein-coding Genes

1280 genes

Non-Coding Genes

31 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloprotease rsepDBW71_06520Not AvailablePositive1258207 - 125931641323.6
outer membrane protein assembly factor bamaDBW71_06525Not AvailablePositive1259364 - 126140775782.0
sigma-54-dependent fis family transcriptional regulatorDBW71_06530Not AvailableNegative1261408 - 126262546072.3
pas domain-containing sensor histidine kinaseDBW71_06535Not AvailableNegative1262618 - 126484383754.3
nitrogen regulation protein nr(i)DBW71_06540Not AvailableNegative1264904 - 126633153532.0
two-component sensor histidine kinaseDBW71_06545Not AvailableNegative1266341 - 126742940716.2
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDBW71_06550Not AvailablePositive1267552 - 126873644914.6
cina family proteinDBW71_06555Not AvailablePositive1268729 - 126922617955.6
type ii toxin-antitoxin system rata family toxinDBW71_06560Not AvailableNegative1269211 - 126965417445.2
lipoyl synthaseDBW71_06565Not AvailableNegative1269659 - 127062736356.3

Displaying genes 1301 – 1310 of 1311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.