Escherichia marmotae strain SC344

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia marmotae strain SC344 is a Gram-negative bacterium notable for its single replicon structure and the presence of flagella, which may contribute to its motility. The strain is cataloged under the accession number QONO00000000.1, providing a reference for its genomic information. Gram-negative bacteria are characterized by their thin peptidoglycan layer and outer membrane, which can influence their interaction with the environment and other organisms. The presence of flagella in E. marmotae SC344 suggests that this strain has the capability for active movement, potentially aiding in its ability to colonize and thrive in various ecological niches. The single replicon indicates a streamlined genomic organization, which can be advantageous for the bacterium in terms of replication efficiency and resource allocation. This trait may allow E. marmotae SC344 to adapt quickly to its surroundings, although specific ecological roles or habitats for this strain are not detailed in the provided data. Overall, the characteristics of Escherichia marmotae strain SC344, particularly its Gram-negative status and motility due to flagella, suggest that it may play a role in microbial dynamics within its environment, possibly influencing nutrient cycling or interactions with other microorganisms. Further studies would be necessary to elucidate its ecological significance fully.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia marmotae
Strainstrain SC344

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia marmotae strain SC344
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia marmotae strain SC344

Gene Summary

Adenine Count

1236125 bp

Thymine Count

1229682 bp

Guanine Count

1237652 bp

Cytosine Count

1260140 bp

Genome Length

4967385 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

331 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane metabolite transport protein yhjeC4A13_03725Not AvailableNegative2802441 - 280376347196.9
inner membrane protein yhjdC4A13_03726Not AvailableNegative2804174 - 280518737979.7
hth-type transcriptional regulator dmlrC4A13_03727Not AvailableNegative2805236 - 280620736061.8
response regulator protein vrarC4A13_03728Not AvailablePositive2806654 - 280725622585.6
cytoplasmic trehalaseC4A13_03729Not AvailableNegative2807308 - 280895763737.8
hypothetical proteinC4A13_03730Not AvailablePositive2809173 - 28093286001.66
caudovirales tail fiber assembly proteinC4A13_04584Not AvailablePositive2810019 - 281062722055.6
caudovirales tail fiber assembly proteinC4A13_04585Not AvailableNegative2810599 - 281104216320.2
hypothetical proteinC4A13_04586Not AvailableNegative2811042 - 281137411328.7
is2 repressor tnpaC4A13_04443Not AvailablePositive2811480 - 281215725787.8

Displaying genes 2741 – 2750 of 4730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.