Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative protein ulx | DTM10_16480 | Not Available | Positive | 3227011 - 3227451 | 17038.2 |
| Modulator protein | DTM10_16485 | Not Available | Positive | 3227448 - 3227696 | 9664.54 |
| Putative adenine-specific dna methyltransferase | DTM10_16490 | Not Available | Positive | 3227842 - 3229788 | 73736.1 |
| Res | DTM10_16495 | Not Available | Positive | 3229791 - 3232703 | 111379.0 |
| Mat | DTM10_16500 | Not Available | Negative | 3232779 - 3233420 | 24607.8 |
| Ref | DTM10_16505 | Not Available | Negative | 3233609 - 3234169 | 21390.0 |
| Putative lysogeny establishment protein | DTM10_16510 | Not Available | Negative | 3234416 - 3234727 | 11281.8 |
| Gst-loxp-cre recombinase fusion protein | DTM10_16515 | Not Available | Negative | 3234778 - 3235809 | 38526.4 |
| Putative cre-associated regulatory protein | DTM10_16520 | Not Available | Negative | 3235817 - 3236038 | 8676.36 |
| Imca | DTM10_16525 | Not Available | Positive | 3236450 - 3236563 | 4311.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





