Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | DTM10_02195 | Not Available | Negative | 444932 - 445591 | 24848.0 |
| rna polymerase-associated protein rapa | DTM10_02200 | Not Available | Negative | 445603 - 448509 | 109776.0 |
| dna polymerase ii | DTM10_02205 | Not Available | Negative | 448673 - 451024 | 90015.6 |
| l-ribulose-5-phosphate 4-epimerase | DTM10_02210 | Not Available | Negative | 451099 - 451794 | 25428.3 |
| l-arabinose isomerase | DTM10_02215 | Not Available | Negative | 451994 - 453496 | 56106.2 |
| ribulokinase | DTM10_02220 | Not Available | Negative | 453507 - 455207 | 61228.8 |
| arabinose operon regulatory protein | DTM10_02230 | Not Available | Positive | 455546 - 456424 | 33385.8 |
| deda family protein | DTM10_02235 | Not Available | Positive | 456510 - 457274 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | DTM10_02240 | Not Available | Negative | 457388 - 458086 | 25051.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DTM10_02245 | Not Available | Negative | 458070 - 459680 | 59434.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





