Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DTM10_02040 | Not Available | Positive | 412340 - 413290 | 34776.6 |
| ribonucleoside hydrolase rihc | DTM10_02045 | Not Available | Positive | 413356 - 414270 | 32669.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DTM10_02050 | Not Available | Positive | 414437 - 415258 | 28772.4 |
| hypothetical protein | DTM10_02055 | Not Available | Positive | 415364 - 415561 | 7544.68 |
| carbamoyl-phosphate synthase small subunit | DTM10_02060 | Not Available | Positive | 415714 - 416862 | 41459.4 |
| carbamoyl-phosphate synthase large chain | DTM10_02065 | Not Available | Positive | 416880 - 420101 | 117930.0 |
| hypothetical protein | DTM10_02070 | Not Available | Negative | 420109 - 420327 | 8154.88 |
| carnitine metabolism transcriptional regulator caif | DTM10_02075 | Not Available | Positive | 420362 - 420757 | 15363.0 |
| carnitine operon protein caie | DTM10_02080 | Not Available | Negative | 420877 - 421467 | 21176.6 |
| carnitinyl-coa dehydratase | DTM10_02085 | Not Available | Negative | 421473 - 422258 | 28177.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





