Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major capsid protein e | DTM10_29550 | Not Available | Positive | 5491145 - 5491246 | 3564.28 |
| dna-packaging protein fi | DTM10_29555 | Not Available | Positive | 5491288 - 5491686 | 14294.7 |
| hypothetical protein | DTM10_29560 | Not Available | Positive | 5491698 - 5491773 | 2765.21 |
| hypothetical protein | DTM10_29565 | Not Available | Negative | 5491774 - 5491851 | 2868.35 |
| dna-packaging protein fi | DTM10_29570 | Not Available | Negative | 5491863 - 5492258 | 13988.3 |
| major capsid protein e | DTM10_29575 | Not Available | Negative | 5492300 - 5492399 | 3465.14 |
| is5 family transposase | DTM10_29580 | Not Available | Positive | 5492400 - 5492874 | 17900.5 |
| antirestriction protein | DTM10_29590 | Not Available | Positive | 5493622 - 5493770 | 5548.73 |
| hypothetical protein | DTM10_29600 | Not Available | Positive | 5493815 - 5494210 | 14888.0 |
| phage tail protein | DTM10_29605 | Not Available | Positive | 5494211 - 5494688 | 16300.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





