Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DTM10_29480 | Not Available | Positive | 5481637 - 5482168 | 19133.1 |
| divalent metal cation transporter | DTM10_29500 | Not Available | Negative | 5485496 - 5485957 | 16131.3 |
| phage terminase large subunit family protein | DTM10_29505 | Not Available | Negative | 5485958 - 5486188 | 8891.56 |
| terminase small subunit | DTM10_29510 | Not Available | Negative | 5486163 - 5486630 | 16984.2 |
| duf3387 domain-containing protein | DTM10_29515 | Not Available | Positive | 5486638 - 5487316 | 25932.2 |
| is5 family transposase | DTM10_29520 | Not Available | Negative | 5487317 - 5487895 | 22404.1 |
| dna helicase | DTM10_29525 | Not Available | Positive | 5487964 - 5488606 | 23318.6 |
| is200/is605 family transposase | DTM10_29535 | Not Available | Negative | 5489359 - 5489868 | 19917.3 |
| host specificity protein j | DTM10_29540 | Not Available | Positive | 5489885 - 5490514 | 24189.6 |
| host specificity protein j | DTM10_29545 | Not Available | Positive | 5490515 - 5491144 | 24094.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





