Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | DTM10_29425 | Not Available | Positive | 5476513 - 5476620 | 3864.89 |
| hypothetical protein | DTM10_29430 | Not Available | Negative | 5476625 - 5476933 | 10725.2 |
| type i toxin-antitoxin system toxin ldr family protein | DTM10_29435 | Not Available | Positive | 5476996 - 5477090 | 3356.26 |
| antirestriction protein | DTM10_29440 | Not Available | Negative | 5477091 - 5477534 | 16785.7 |
| duf932 domain-containing protein | DTM10_29445 | Not Available | Negative | 5477625 - 5477859 | 8868.7 |
| is1 family transposase | DTM10_29450 | Not Available | Negative | 5478518 - 5478624 | 4003.86 |
| is6 family transposase is15div | DTM10_29460 | Not Available | Positive | 5479392 - 5480096 | 27896.9 |
| hd domain-containing protein | DTM10_29465 | Not Available | Positive | 5480149 - 5480452 | 11186.5 |
| tigr03503 family protein | DTM10_29470 | Not Available | Negative | 5480533 - 5480893 | 12623.5 |
| acyl-coa thioester hydrolase ycia | DTM10_29475 | Not Available | Positive | 5481010 - 5481495 | 17883.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





