Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3387 domain-containing protein | DTM10_29130 | Not Available | Positive | 5435083 - 5436690 | 62096.3 |
| rep protein | DTM10_29140 | Not Available | Positive | 5436899 - 5437150 | 9061.16 |
| hypothetical protein | DTM10_29145 | Not Available | Negative | 5437169 - 5437750 | 23029.6 |
| hypothetical protein | DTM10_29150 | Not Available | Negative | 5437743 - 5438223 | 18238.9 |
| host specificity protein j | DTM10_29155 | Not Available | Negative | 5438224 - 5438853 | 22926.0 |
| tail assembly protein | DTM10_29160 | Not Available | Negative | 5438914 - 5439585 | 23095.0 |
| phage tail protein | DTM10_29165 | Not Available | Negative | 5439483 - 5439732 | 9232.83 |
| hypothetical protein | DTM10_29170 | Not Available | Positive | 5439733 - 5440387 | 24414.4 |
| hypothetical protein | DTM10_29175 | Not Available | Positive | 5440405 - 5440785 | 14504.3 |
| type i addiction module toxin, syme family | DTM10_29180 | Not Available | Negative | 5440851 - 5441093 | 8929.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





