Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | DTM10_29005 | Not Available | Negative | 5421560 - 5422483 | 33607.6 |
| transposase family protein | DTM10_29010 | Not Available | Negative | 5422484 - 5422724 | 9219.09 |
| type i toxin-antitoxin system syme family toxin | DTM10_29015 | Not Available | Positive | 5422876 - 5423205 | 12502.9 |
| hypothetical protein | DTM10_29020 | Not Available | Negative | 5423257 - 5423625 | 14357.5 |
| hypothetical protein | DTM10_29025 | Not Available | Negative | 5423625 - 5424269 | 24424.8 |
| transposase family protein | DTM10_29030 | Not Available | Negative | 5424283 - 5424424 | 5078.37 |
| rhs family protein | DTM10_29035 | Not Available | Positive | 5424438 - 5425055 | 23377.5 |
| hypothetical protein | DTM10_29040 | Not Available | Positive | 5425057 - 5425383 | 12747.0 |
| isas1 family transposase | DTM10_29055 | Not Available | Positive | 5426063 - 5426303 | 9158.98 |
| rep protein | DTM10_29065 | Not Available | Negative | 5426993 - 5427292 | 10867.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





