Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 import system permease lsrd | DTM10_28885 | Not Available | Positive | 5401894 - 5402886 | 34444.6 |
| phage tail protein | DTM10_28900 | Not Available | Positive | 5406678 - 5407173 | 16398.6 |
| tail fiber assembly protein | DTM10_28905 | Not Available | Positive | 5407173 - 5407790 | 23162.8 |
| serine acetyltransferase | DTM10_28910 | Not Available | Negative | 5407754 - 5408299 | 20373.9 |
| hypothetical protein | DTM10_28915 | Not Available | Negative | 5408841 - 5409062 | 8176.5 |
| coproporphyrinogen iii oxidase | DTM10_28920 | Not Available | Positive | 5409061 - 5409153 | 3243.99 |
| host specificity protein j | DTM10_28925 | Not Available | Positive | 5409203 - 5409872 | 23160.3 |
| ail/lom family protein | DTM10_28930 | Not Available | Positive | 5409943 - 5410542 | 21413.7 |
| short-chain fatty acid transporter | DTM10_28935 | Not Available | Positive | 5410607 - 5411697 | 34400.4 |
| hypothetical protein | DTM10_28945 | Not Available | Positive | 5412274 - 5412456 | 6787.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





