Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DTM10_28215 | Not Available | Negative | 5304919 - 5305290 | 14141.5 |
| transposase | DTM10_28220 | Not Available | Negative | 5305287 - 5305787 | 18949.6 |
| hypothetical protein | DTM10_28225 | Not Available | Negative | 5305784 - 5306110 | 12534.0 |
| cupin domain-containing protein | DTM10_28230 | Not Available | Negative | 5306365 - 5306721 | 12783.2 |
| duf86 domain-containing protein | DTM10_28235 | Not Available | Negative | 5306711 - 5307112 | 15263.8 |
| nucleotidyltransferase | DTM10_28240 | Not Available | Negative | 5307109 - 5307399 | 10318.5 |
| tn3-like element ispa38 family transposase | DTM10_28245 | Not Available | Positive | 5307558 - 5310524 | 111277.0 |
| sulfate abc transporter substrate-binding protein | DTM10_28255 | Not Available | Positive | 5311405 - 5311992 | 21465.8 |
| formate dehydrogenase-n subunit alpha | DTM10_28260 | Not Available | Positive | 5312041 - 5314452 | 89767.8 |
| formate dehydrogenase nitrate-inducible iron-sulfur subunit | DTM10_28265 | Not Available | Positive | 5314465 - 5315349 | 32240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





