Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin | DTM10_28035 | Not Available | Negative | 5278507 - 5279022 | 18998.9 |
| hypothetical protein | DTM10_28040 | Not Available | Positive | 5280394 - 5280684 | 10882.0 |
| hypothetical protein | DTM10_28045 | Not Available | Negative | 5280676 - 5280954 | 10481.8 |
| entry exclusion protein 2 | DTM10_28050 | Not Available | Positive | 5281076 - 5281498 | 15873.1 |
| plasmid mobilization protein | DTM10_28055 | Not Available | Negative | 5281504 - 5281632 | 4793.96 |
| hypothetical protein | DTM10_28060 | Not Available | Negative | 5281623 - 5281844 | 8222.9 |
| nuclease | DTM10_28065 | Not Available | Negative | 5281872 - 5283470 | 59210.2 |
| plasmid mobilization relaxosome protein mobc | DTM10_28070 | Not Available | Negative | 5283460 - 5283807 | 12866.7 |
| rop family plasmid primer rna-binding protein | DTM10_28075 | Not Available | Positive | 5283851 - 5284042 | 7197.42 |
| is3 family transposase | DTM10_28090 | Not Available | Positive | 5284754 - 5285105 | 12925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





