Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | DTM10_27225 | Not Available | Negative | 5137480 - 5138151 | 23571.2 |
| protein trae | DTM10_27230 | Not Available | Negative | 5138195 - 5138761 | 21225.5 |
| type iv conjugative transfer system protein tral | DTM10_27235 | Not Available | Negative | 5138783 - 5139094 | 11904.7 |
| type iv conjugative transfer system pilin traa | DTM10_27240 | Not Available | Negative | 5139109 - 5139468 | 12694.2 |
| relaxosome protein tray | DTM10_27245 | Not Available | Negative | 5139501 - 5139896 | 15184.2 |
| conjugal transfer protein traj | DTM10_27250 | Not Available | Negative | 5139995 - 5140684 | 27063.3 |
| conjugal transfer protein tram | DTM10_27255 | Not Available | Negative | 5140871 - 5141254 | 14518.3 |
| lytic transglycosylase | DTM10_27260 | Not Available | Positive | 5141575 - 5142177 | 22846.8 |
| duf945 domain-containing protein | DTM10_27265 | Not Available | Negative | 5142474 - 5143349 | 33750.5 |
| hypothetical protein | DTM10_27270 | Not Available | Negative | 5143415 - 5143717 | 11494.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





