Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein csph | DTM10_25505 | Not Available | Positive | 4829522 - 4829734 | 7720.48 |
| hypothetical protein | DTM10_25510 | Not Available | Positive | 4829942 - 4830007 | 2169.58 |
| glutamate decarboxylase | DTM10_25515 | Not Available | Negative | 4830008 - 4831056 | 39540.2 |
| cytochrome-c peroxidase | DTM10_25520 | Not Available | Negative | 4831267 - 4832664 | 51542.3 |
| alpha,alpha-trehalase tref | DTM10_25525 | Not Available | Positive | 4833069 - 4834718 | 63699.1 |
| helix-turn-helix transcriptional regulator | DTM10_25530 | Not Available | Negative | 4834769 - 4835371 | 22605.6 |
| lysr family transcriptional regulator | DTM10_25535 | Not Available | Positive | 4835891 - 4836790 | 33357.7 |
| inner membrane protein yhjd | DTM10_25540 | Not Available | Positive | 4836839 - 4837852 | 37902.6 |
| mfs transporter | DTM10_25545 | Not Available | Positive | 4838245 - 4839567 | 47226.9 |
| asma family protein | DTM10_25550 | Not Available | Negative | 4839749 - 4841809 | 74492.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





