Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof-type had-iib family hydrolase | DTM10_24425 | Not Available | Negative | 4649469 - 4650287 | 30180.9 |
| 6-phosphogluconolactonase | DTM10_24430 | Not Available | Positive | 4650442 - 4651437 | 36309.6 |
| lysr family transcriptional regulator | DTM10_24435 | Not Available | Negative | 4651478 - 4652431 | 36074.2 |
| 4-oxalomesaconate tautomerase | DTM10_24440 | Not Available | Positive | 4652615 - 4653667 | 37008.7 |
| anion permease | DTM10_24445 | Not Available | Positive | 4653743 - 4655176 | 51326.8 |
| hydratase | DTM10_24450 | Not Available | Positive | 4655359 - 4657620 | 81435.1 |
| putative acyl-coa thioester hydrolase | DTM10_24455 | Not Available | Negative | 4657761 - 4659044 | 46010.6 |
| gamma carbonic anhydrase family protein | DTM10_24655 | Not Available | Positive | 4676770 - 4677540 | 28474.7 |
| duf1488 domain-containing protein | DTM10_24660 | Not Available | Negative | 4677516 - 4677773 | 10007.5 |
| shikimate dehydrogenase (nadp+) | DTM10_24665 | Not Available | Negative | 4677770 - 4678588 | 29380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





