Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter permease | DTM10_23685 | Not Available | Positive | 4510263 - 4510922 | 24365.8 |
| glutamine abc transporter atp-binding protein glnq | DTM10_23690 | Not Available | Positive | 4510919 - 4511641 | 26733.6 |
| mechanosensitive channel protein | DTM10_23695 | Not Available | Positive | 4511758 - 4513983 | 81901.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DTM10_23700 | Not Available | Negative | 4513980 - 4514996 | 37794.2 |
| duf1471 domain-containing protein | DTM10_23705 | Not Available | Positive | 4515038 - 4515442 | 14588.7 |
| pkhd-type hydroxylase | DTM10_23715 | Not Available | Positive | 4518202 - 4518879 | 25514.2 |
| dksa/trar family c4-type zinc finger protein | DTM10_23720 | Not Available | Positive | 4518953 - 4519219 | 9804.42 |
| duf1471 domain-containing protein | DTM10_23725 | Not Available | Positive | 4519484 - 4519744 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | DTM10_23730 | Not Available | Negative | 4519973 - 4521058 | 38929.4 |
| dna-binding protein ybib | DTM10_23735 | Not Available | Negative | 4521199 - 4522161 | 35082.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





