Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | DTM10_23520 | Not Available | Positive | 4477273 - 4478343 | 39396.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DTM10_23525 | Not Available | Positive | 4478343 - 4479410 | 40207.3 |
| imidazole glycerol phosphate synthase subunit hish | DTM10_23530 | Not Available | Positive | 4479410 - 4480000 | 21638.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DTM10_23535 | Not Available | Positive | 4480000 - 4480737 | 26069.3 |
| imidazole glycerol phosphate synthase cyclase subunit | DTM10_23540 | Not Available | Positive | 4480719 - 4481495 | 28486.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | DTM10_23545 | Not Available | Positive | 4481489 - 4482100 | 22885.2 |
| lps o-antigen chain length determinant protein wzzb | DTM10_23550 | Not Available | Negative | 4482197 - 4483174 | 36372.7 |
| udp-glucose 6-dehydrogenase | DTM10_23555 | Not Available | Negative | 4483320 - 4484486 | 43574.1 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DTM10_23560 | Not Available | Negative | 4484735 - 4486141 | 51526.2 |
| polysaccharide biosynthesis protein | DTM10_23565 | Not Available | Negative | 4486204 - 4487619 | 54445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





