Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DTM10_22300 | Not Available | Positive | 4290709 - 4291251 | 20715.4 |
| piln family type ivb pilus formation outer membrane protein | DTM10_22305 | Not Available | Positive | 4291244 - 4292887 | 58039.9 |
| pilin accessory family protein | DTM10_22310 | Not Available | Positive | 4292926 - 4294248 | 49822.3 |
| type iv pilus biogenesis protein pilp | DTM10_22315 | Not Available | Positive | 4294232 - 4294726 | 17634.2 |
| type ii secretion protein e | DTM10_22320 | Not Available | Positive | 4294751 - 4296289 | 57375.3 |
| type ii secretion protein f | DTM10_22325 | Not Available | Positive | 4296280 - 4297389 | 41831.3 |
| hypothetical protein | DTM10_22330 | Not Available | Positive | 4297434 - 4297991 | 19794.6 |
| lytic transglycosylase | DTM10_22335 | Not Available | Positive | 4298057 - 4298539 | 18159.2 |
| prepilin peptidase | DTM10_22340 | Not Available | Positive | 4298543 - 4299178 | 23733.0 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | DTM10_22345 | Not Available | Positive | 4299191 - 4300435 | 43979.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





