Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper transporter | DTM10_20050 | Not Available | Positive | 3893041 - 3893196 | 5829.17 |
| cu(i)/ag(i) efflux rnd transporter outer membrane protein | DTM10_20055 | Not Available | Positive | 3893151 - 3894533 | 50812.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone | DTM10_20060 | Not Available | Positive | 3894557 - 3894889 | 12326.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | DTM10_20065 | Not Available | Positive | 3894905 - 3896128 | 44455.5 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | DTM10_20070 | Not Available | Positive | 3896140 - 3899283 | 114746.0 |
| aromatic amino acid transporter arop | DTM10_20075 | Not Available | Positive | 3899385 - 3900761 | 50648.3 |
| mechanosensitive ion channel family protein | DTM10_20080 | Not Available | Negative | 3900829 - 3902076 | 46639.5 |
| oxygen-insensitive nad(p)h nitroreductase | DTM10_20085 | Not Available | Negative | 3902184 - 3902837 | 23994.4 |
| mmcq/yjbr family dna-binding protein | DTM10_20090 | Not Available | Negative | 3902916 - 3903299 | 14652.7 |
| duf1158 domain-containing protein | DTM10_20095 | Not Available | Negative | 3903364 - 3903612 | 9434.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





