Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein ybcj | DTM10_19980 | Not Available | Negative | 3879656 - 3879868 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DTM10_19985 | Not Available | Negative | 3879870 - 3880736 | 30987.6 |
| Trna-arg | Not Available | Not Available | Positive | 3881007 - 3881083 | Not Available |
| nucleocapsid protein | DTM10_20010 | Not Available | Positive | 3882049 - 3882174 | 4796.21 |
| class i sam-dependent methyltransferase | DTM10_20015 | Not Available | Negative | 3882131 - 3882757 | 22961.5 |
| omptin family outer membrane protease ompt | DTM10_20020 | Not Available | Negative | 3883031 - 3883984 | 35592.2 |
| duf4434 family protein | DTM10_20025 | Not Available | Negative | 3884642 - 3885532 | 33040.5 |
| phage adsorption protein nrfb | DTM10_20035 | Not Available | Negative | 3888492 - 3890729 | 85390.4 |
| cu(+)/ag(+) sensor histidine kinase cuss | DTM10_20040 | Not Available | Negative | 3890879 - 3892321 | 53761.2 |
| dna-binding response regulator | DTM10_20045 | Not Available | Negative | 3892311 - 3892994 | 25396.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





