Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase fdra | DTM10_19925 | Not Available | Positive | 3869338 - 3871005 | 58601.4 |
| duf1116 domain-containing protein | DTM10_19930 | Not Available | Positive | 3871015 - 3872274 | 44976.7 |
| duf2877 domain-containing protein | DTM10_19935 | Not Available | Positive | 3872285 - 3873100 | 29698.0 |
| carbamate kinase | DTM10_19940 | Not Available | Positive | 3873097 - 3873990 | 31674.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DTM10_19945 | Not Available | Negative | 3874523 - 3875590 | 39512.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DTM10_19950 | Not Available | Negative | 3875587 - 3876096 | 17781.3 |
| udp-2,3-diacylglucosamine hydrolase | DTM10_19960 | Not Available | Negative | 3876213 - 3876935 | 26867.6 |
| peptidylprolyl isomerase b | DTM10_19965 | Not Available | Negative | 3876938 - 3877432 | 18168.5 |
| cysteine--trna ligase | DTM10_19970 | Not Available | Positive | 3877606 - 3878991 | 52186.9 |
| metal-dependent hydrolase | DTM10_19975 | Not Available | Negative | 3879027 - 3879548 | 19511.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





