Escherichia coli strain AVC154

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain AVC154 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells. This strain thrives optimally at 37.0°C, which aligns with the average body temperature of warm-blooded hosts, suggesting its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli strain AVC154 can grow in both aerobic and anaerobic environments, allowing it to exploit a diverse range of ecological niches within its host. The ability to adapt to different oxygen conditions may enhance its survival in varying microenvironments within the host, where oxygen levels can fluctuate significantly. This trait is noteworthy as it enables the strain to engage in various metabolic pathways, potentially influencing its interactions with the host's microbiome and immune system. The dual capability of aerobic respiration and fermentation also suggests that E. coli strain AVC154 may play a versatile role in nutrient cycling within its habitat, contributing to the overall metabolic dynamics of the host-associated microbial community. Further exploration of this strain could provide insights into its ecological roles and interactions in host environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain AVC154
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain AVC154

Accession NumberQOGI00000000.1

Gene Summary

Adenine Count

1373421 bp

Thymine Count

1371542 bp

Guanine Count

1390224 bp

Cytosine Count

1384564 bp

Genome Length

5520112 bp

Protein-coding Genes

5254 genes

Non-Coding Genes

451 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Immunity c function protein imcbDTM10_16530Not Available+3236582 - 32366773660.34
C1 inactivator protein coiDTM10_16535Not Available+3236643 - 32368527789.87
Repressor protein c1DTM10_16540Not Available+3236963 - 323781432531.1
Antirepressor proteinDTM10_16545Not Available-3237847 - 323896241964.5
IcdDTM10_16550Not Available-3238959 - 323931812899.2
hypothetical proteinDTM10_16555Not Available-3239337 - 32395437571.22
Putative large terminase proteinDTM10_16560Not Available-3239540 - 324102455548.7
Terminase a protein pacaDTM10_16565Not Available-3241024 - 324221745106.4
Late promoter-activating protein lpaDTM10_16570Not Available-3242303 - 324275518118.8
Hypothetical proteinDTM10_16575Not Available-3242844 - 324388739734.8

Displaying genes 31 – 40 of 5705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites