Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikb | DTM10_19000 | Not Available | Positive | 3698971 - 3699915 | 35231.2 |
| nickel abc transporter permease subunit nikc | DTM10_19005 | Not Available | Positive | 3699912 - 3700745 | 30345.8 |
| nickel import atp-binding protein nikd | DTM10_19010 | Not Available | Positive | 3700745 - 3701509 | 26812.2 |
| nickel import atp-binding protein nike | DTM10_19015 | Not Available | Positive | 3701506 - 3702312 | 29695.5 |
| nickel-responsive transcriptional regulator nikr | DTM10_19020 | Not Available | Positive | 3702318 - 3702719 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | DTM10_19025 | Not Available | Negative | 3702839 - 3703198 | 13390.0 |
| type ii toxin-antitoxin system hica family toxin | DTM10_19030 | Not Available | Negative | 3703195 - 3703470 | 10186.4 |
| abc transporter permease | DTM10_19035 | Not Available | Negative | 3703543 - 3704667 | 41020.1 |
| abc transporter atp-binding protein/permease | DTM10_19040 | Not Available | Negative | 3704667 - 3707402 | 100703.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | DTM10_19045 | Not Available | Negative | 3707399 - 3708466 | 38774.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





