Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | DTM10_18900 | Not Available | Negative | 3680009 - 3681118 | 39392.0 |
| aspartate 1-decarboxylase autocleavage activator panm | DTM10_18905 | Not Available | Positive | 3681542 - 3681925 | 14492.3 |
| branched chain amino acid abc transporter substrate-binding protein | DTM10_18910 | Not Available | Negative | 3682113 - 3683216 | 39078.5 |
| hypothetical protein | DTM10_18915 | Not Available | Negative | 3683275 - 3683460 | 7026.8 |
| rna polymerase sigma factor rpoh | DTM10_18920 | Not Available | Negative | 3683488 - 3684342 | 32470.6 |
| abc transporter permease | DTM10_18925 | Not Available | Negative | 3684587 - 3685645 | 38545.9 |
| cell division atp-binding protein ftse | DTM10_18930 | Not Available | Negative | 3685638 - 3686306 | 24440.8 |
| signal recognition particle-docking protein ftsy | DTM10_18935 | Not Available | Negative | 3686309 - 3687805 | 54623.3 |
| ribosomal rna small subunit methyltransferase d | DTM10_18940 | Not Available | Positive | 3687955 - 3688551 | 21678.8 |
| duf1145 family protein | DTM10_18945 | Not Available | Positive | 3688541 - 3688810 | 10280.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





