Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid transfer protein | DTM10_18535 | Not Available | Positive | 3624130 - 3624615 | 19092.0 |
| hypothetical protein | DTM10_18540 | Not Available | Positive | 3624612 - 3625349 | 28169.7 |
| helicase | DTM10_18545 | Not Available | Positive | 3625359 - 3628505 | 117779.0 |
| hypothetical protein | DTM10_18550 | Not Available | Positive | 3628505 - 3630589 | 78142.3 |
| hypothetical protein | DTM10_18555 | Not Available | Positive | 3630589 - 3631698 | 42577.0 |
| duf4400 domain-containing protein | DTM10_18560 | Not Available | Positive | 3631685 - 3632347 | 25731.0 |
| s49 family peptidase | DTM10_18565 | Not Available | Positive | 3632358 - 3633539 | 42894.8 |
| nerd domain-containing protein | DTM10_18570 | Not Available | Positive | 3633541 - 3634272 | 27915.3 |
| hypothetical protein | DTM10_18575 | Not Available | Negative | 3634559 - 3634912 | 13167.9 |
| hypothetical protein | DTM10_18580 | Not Available | Negative | 3634978 - 3635262 | 10602.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





