Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DTM10_18015 | Not Available | Positive | 3522677 - 3523666 | 37096.5 |
| alpha/beta hydrolase | DTM10_18020 | Not Available | Negative | 3523730 - 3524638 | 33623.1 |
| type ii toxin-antitoxin system rele/pare family toxin | DTM10_18025 | Not Available | Positive | 3524867 - 3525178 | 12190.9 |
| helix-turn-helix domain-containing protein | DTM10_18030 | Not Available | Positive | 3525179 - 3525469 | 10847.1 |
| copg family transcriptional regulator | DTM10_18035 | Not Available | Positive | 3526080 - 3526292 | 8205.94 |
| formate dehydrogenase accessory protein fdhe | DTM10_18040 | Not Available | Negative | 3526507 - 3527436 | 34720.6 |
| formate dehydrogenase cytochrome b556(fdo) subunit | DTM10_18045 | Not Available | Negative | 3527433 - 3528068 | 24607.7 |
| formate dehydrogenase-o iron-sulfur subunit | DTM10_18050 | Not Available | Negative | 3528065 - 3528967 | 33102.1 |
| formate dehydrogenase-n subunit alpha | DTM10_18055 | Not Available | Negative | 3528980 - 3532030 | 112430.0 |
| hypothetical protein | DTM10_18060 | Not Available | Positive | 3532034 - 3532288 | 9637.87 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





