Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DTM10_17915 | Not Available | Negative | 3502268 - 3502378 | 3618.45 |
| nitrogen regulation protein nr(i) | DTM10_17920 | Not Available | Negative | 3502490 - 3503899 | 52257.9 |
| two-component system sensor histidine kinase ntrb | DTM10_17925 | Not Available | Negative | 3503911 - 3504960 | 38558.5 |
| glutamate--ammonia ligase | DTM10_17930 | Not Available | Negative | 3505134 - 3506519 | 51021.6 |
| transporter | DTM10_17935 | Not Available | Negative | 3506677 - 3506823 | 5550.92 |
| translational gtpase typa | DTM10_17940 | Not Available | Positive | 3506916 - 3508739 | 67359.5 |
| transcriptional regulator | DTM10_17945 | Not Available | Positive | 3508957 - 3509667 | 26940.3 |
| hypothetical protein | DTM10_17950 | Not Available | Positive | 3509675 - 3510655 | 36952.9 |
| mfs transporter | DTM10_17955 | Not Available | Positive | 3510757 - 3512022 | 46354.0 |
| deor/glpr transcriptional regulator | DTM10_17960 | Not Available | Negative | 3512082 - 3512870 | 28754.5 |
Pathways
529 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





