Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdta | DTM10_17710 | Not Available | Negative | 3456752 - 3457999 | 44494.9 |
| type i toxin-antitoxin system ibs family toxin | DTM10_17715 | Not Available | Positive | 3458278 - 3458334 | 2136.9 |
| small toxic protein ibsb | DTM10_17720 | Not Available | Positive | 3458605 - 3458661 | 2063.86 |
| type i toxin-antitoxin system ibs family toxin | DTM10_17725 | Not Available | Positive | 3458934 - 3458993 | 2232.03 |
| vwa domain-containing protein | DTM10_17730 | Not Available | Positive | 3459214 - 3459873 | 24165.9 |
| protein phosphatase 2c domain-containing protein | DTM10_17735 | Not Available | Positive | 3459870 - 3460631 | 27368.8 |
| molecular chaperone | DTM10_17745 | Not Available | Negative | 3462580 - 3463932 | 49278.1 |
| dna-3-methyladenine glycosylase 2 | DTM10_17750 | Not Available | Positive | 3464066 - 3464923 | 31708.4 |
| diguanylate cyclase | DTM10_17755 | Not Available | Negative | 3464962 - 3468279 | 123948.0 |
| uridine kinase | DTM10_17760 | Not Available | Positive | 3468597 - 3469238 | 24354.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





