Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt homeostasis protein rcnb | DTM10_17505 | Not Available | Negative | 3414872 - 3415210 | 12466.8 |
| nickel/cobalt efflux protein rcna | DTM10_17510 | Not Available | Negative | 3415429 - 3416253 | 30436.2 |
| transcriptional regulator | DTM10_17515 | Not Available | Positive | 3416375 - 3416647 | 10134.5 |
| site-specific integrase | DTM10_17520 | Not Available | Positive | 3416977 - 3418197 | 46949.1 |
| hypothetical protein | DTM10_17525 | Not Available | Positive | 3418194 - 3419048 | 33189.8 |
| alpa family phage regulatory protein | DTM10_17530 | Not Available | Positive | 3419152 - 3419376 | 8504.05 |
| host cell division inhibitor icd-like protein | DTM10_17535 | Not Available | Positive | 3419386 - 3420306 | 33854.6 |
| hypothetical protein | DTM10_17540 | Not Available | Positive | 3420299 - 3420619 | 11644.8 |
| duf4222 domain-containing protein | DTM10_17545 | Not Available | Positive | 3420626 - 3420925 | 11598.1 |
| dna primase | DTM10_17550 | Not Available | Positive | 3420922 - 3422739 | 67673.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





