Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-sorbose 1-phosphate reductase | DTM10_17400 | Not Available | Positive | 3381879 - 3383108 | 44701.2 |
| peptidase e | DTM10_17405 | Not Available | Positive | 3383491 - 3384180 | 24571.7 |
| na/pi cotransporter family protein | DTM10_17410 | Not Available | Negative | 3384270 - 3385901 | 59470.7 |
| methionine synthase | DTM10_17415 | Not Available | Negative | 3386121 - 3389804 | 136070.0 |
| acetate operon transcriptional repressor iclr | DTM10_17420 | Not Available | Positive | 3390004 - 3390828 | 29722.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | DTM10_17425 | Not Available | Negative | 3390845 - 3392569 | 67181.8 |
| isocitrate lyase | DTM10_17430 | Not Available | Negative | 3392785 - 3394089 | 47524.1 |
| malate synthase a | DTM10_17435 | Not Available | Negative | 3394119 - 3395720 | 60304.9 |
| homoserine o-succinyltransferase | DTM10_17440 | Not Available | Negative | 3395989 - 3396918 | 35729.2 |
| acetyltransferase | DTM10_17445 | Not Available | Positive | 3397075 - 3397518 | 16620.9 |
Pathways
310 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





