Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | DTM10_17345 | Not Available | Negative | 3372125 - 3373774 | 61533.1 |
| lysine-sensitive aspartokinase 3 | DTM10_17355 | Not Available | Positive | 3374299 - 3375648 | 48638.7 |
| duf3811 domain-containing protein | DTM10_17360 | Not Available | Positive | 3375902 - 3376174 | 10488.6 |
| 23s rrna pseudouridine synthase f | DTM10_17365 | Not Available | Negative | 3376175 - 3377047 | 32436.4 |
| sugar-binding transcriptional regulator | DTM10_17370 | Not Available | Positive | 3377395 - 3378342 | 34978.9 |
| sdr family nad(p)-dependent oxidoreductase | DTM10_17375 | Not Available | Positive | 3378412 - 3379218 | 29025.7 |
| pts sorbose transporter subunit iia | DTM10_17380 | Not Available | Positive | 3379228 - 3379635 | 14820.0 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | DTM10_17385 | Not Available | Positive | 3379635 - 3380129 | 18444.2 |
| pts mannose/fructose/sorbose transporter subunit iic | DTM10_17390 | Not Available | Positive | 3380195 - 3380992 | 28032.2 |
| pts mannose transporter subunit iid | DTM10_17395 | Not Available | Positive | 3380973 - 3381827 | 30559.3 |
Pathways
380 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





