Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-sensitive transcriptional activator soxr | DTM10_17145 | Not Available | Negative | 3334866 - 3335330 | 17235.8 |
| regulatory protein soxs | DTM10_17150 | Not Available | Positive | 3335416 - 3335739 | 12911.6 |
| eal domain-containing protein | DTM10_17155 | Not Available | Negative | 3335742 - 3337328 | 60658.4 |
| integrase | DTM10_17160 | Not Available | Negative | 3337652 - 3337798 | 5021.95 |
| hypothetical protein | DTM10_17165 | Not Available | Positive | 3337757 - 3338038 | 10304.0 |
| ssdna-binding protein | DTM10_17170 | Not Available | Negative | 3338137 - 3338673 | 18976.1 |
| excinuclease abc subunit a | DTM10_17175 | Not Available | Positive | 3338928 - 3341750 | 103874.0 |
| mmcq/yjbr family dna-binding protein | DTM10_17180 | Not Available | Negative | 3341785 - 3342141 | 13467.1 |
| thiamine phosphate synthase | DTM10_17185 | Not Available | Negative | 3342145 - 3342561 | 15656.8 |
| class b acid phosphatase | DTM10_17190 | Not Available | Negative | 3342672 - 3343385 | 26117.9 |
Pathways
785 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





