Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | DTM10_17045 | Not Available | Positive | 3317441 - 3318130 | 25080.4 |
| glutamate/aspartate:proton symporter gltp | DTM10_17050 | Not Available | Negative | 3318548 - 3319861 | 47134.0 |
| hypothetical protein | DTM10_17055 | Not Available | Positive | 3319775 - 3319966 | 7230.62 |
| heme lysase nrfefg subunit nrfg | DTM10_17060 | Not Available | Negative | 3320203 - 3320799 | 22784.4 |
| heme lyase nrfefg subunit nrff | DTM10_17065 | Not Available | Negative | 3320796 - 3321179 | 14603.0 |
| heme lyase ccmf/nrfe family subunit | DTM10_17070 | Not Available | Negative | 3321172 - 3322830 | 61566.5 |
| cytochrome c nitrite reductase subunit nrfd | DTM10_17075 | Not Available | Negative | 3322910 - 3323866 | 34984.3 |
| protein nrfc | DTM10_17080 | Not Available | Negative | 3323863 - 3324534 | 24554.7 |
| cytochrome c-type protein nrfb | DTM10_17085 | Not Available | Negative | 3324531 - 3325097 | 20715.6 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | DTM10_17090 | Not Available | Negative | 3325142 - 3326578 | 53678.6 |
Pathways
920 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





