Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-allose abc transporter atp-binding protein alsa | DTM10_16995 | Not Available | Positive | 3303587 - 3305119 | 56768.4 |
| d-allose abc transporter permease | DTM10_17000 | Not Available | Positive | 3305098 - 3306078 | 34313.8 |
| ribulose-phosphate 3-epimerase | DTM10_17005 | Not Available | Positive | 3306089 - 3306784 | 26051.6 |
| allose kinase | DTM10_17010 | Not Available | Positive | 3306768 - 3307697 | 33819.8 |
| alkyl/aryl-sulfatase | DTM10_17015 | Not Available | Positive | 3307970 - 3309955 | 73291.1 |
| hypothetical protein | DTM10_17020 | Not Available | Positive | 3310163 - 3310438 | 10271.2 |
| multidrug transporter subunit mdtn | DTM10_17025 | Not Available | Positive | 3310457 - 3311488 | 36938.3 |
| multidrug transporter subunit mdto | DTM10_17030 | Not Available | Positive | 3311488 - 3313539 | 76167.2 |
| multidrug resistance transporter | DTM10_17035 | Not Available | Positive | 3313536 - 3315002 | 53440.3 |
| formate dehydrogenase subunit alpha | DTM10_17040 | Not Available | Positive | 3315200 - 3317347 | 79272.1 |
Pathways
866 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





