Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DTM10_16310 | Not Available | Negative | 3197395 - 3197625 | 8582.57 |
| hypothetical protein | DTM10_16315 | Not Available | Positive | 3197888 - 3198145 | 9854.0 |
| transporter | DTM10_16320 | Not Available | Negative | 3198344 - 3198463 | 4828.18 |
| hypothetical protein | DTM10_16330 | Not Available | Negative | 3198619 - 3198801 | 6870.28 |
| duf1380 domain-containing protein | DTM10_16335 | Not Available | Negative | 3198801 - 3199196 | 14746.6 |
| antirestriction protein | DTM10_16340 | Not Available | Negative | 3199262 - 3199687 | 16291.3 |
| hypothetical protein | DTM10_16355 | Not Available | Negative | 3201281 - 3201562 | 11110.2 |
| colicin b immunity protein | DTM10_16365 | Not Available | Negative | 3201920 - 3202447 | 20130.5 |
| lipid ii-degrading bacteriocin colicin m | DTM10_16375 | Not Available | Positive | 3202691 - 3203506 | 29486.2 |
| colicin m immunity protein | DTM10_16380 | Not Available | Negative | 3203556 - 3203909 | 13776.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





