Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DTM10_16260 | Not Available | Positive | 3189438 - 3189764 | 12003.3 |
| transcriptional repressor | DTM10_16265 | Not Available | Negative | 3189848 - 3190294 | 16795.8 |
| ryhb-regulated fur leader peptide | DTM10_16270 | Not Available | Negative | 3190287 - 3190373 | 3118.76 |
| flavodoxin-1 | DTM10_16275 | Not Available | Negative | 3190583 - 3191113 | 19737.9 |
| lexa regulated protein | DTM10_16280 | Not Available | Negative | 3191253 - 3191546 | 11280.7 |
| esterase | DTM10_16285 | Not Available | Negative | 3191686 - 3192450 | 28433.9 |
| replication initiation regulator seqa | DTM10_16290 | Not Available | Positive | 3192635 - 3193180 | 20316.6 |
| phosphoglucomutase | DTM10_16295 | Not Available | Positive | 3193206 - 3194846 | 58410.3 |
| class i sam-dependent methyltransferase | DTM10_16300 | Not Available | Negative | 3195371 - 3195934 | 21079.7 |
| duf3560 domain-containing protein | DTM10_16305 | Not Available | Negative | 3195982 - 3197343 | 51810.3 |
Pathways
888 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





