Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3176404 - 3176480 | Not Available |
| hypothetical protein | DTM10_16210 | Not Available | Positive | 3176523 - 3176717 | 7284.82 |
| asparagine synthetase b | DTM10_16220 | Not Available | Negative | 3177291 - 3178955 | 62676.4 |
| ribonucleotide monophosphatase nagd | DTM10_16225 | Not Available | Negative | 3179351 - 3180103 | 27164.6 |
| n-acetylglucosamine repressor | DTM10_16230 | Not Available | Negative | 3180151 - 3181371 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DTM10_16235 | Not Available | Negative | 3181380 - 3182528 | 40979.5 |
| glucosamine-6-phosphate deaminase | DTM10_16240 | Not Available | Negative | 3182588 - 3183388 | 29775.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | DTM10_16245 | Not Available | Positive | 3183721 - 3185667 | 68361.9 |
| glutamine--trna ligase | DTM10_16250 | Not Available | Positive | 3185870 - 3187534 | 63541.3 |
| chitoporin | DTM10_16255 | Not Available | Positive | 3187982 - 3189388 | 52772.8 |
Pathways
889 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





