Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspe | DTM10_16000 | Not Available | Positive | 3143750 - 3143959 | 7463.84 |
| fluoride efflux transporter crcb | DTM10_16005 | Not Available | Negative | 3144013 - 3144396 | 13766.1 |
| deaminated glutathione amidase | DTM10_16010 | Not Available | Positive | 3144492 - 3145280 | 28664.0 |
| twin-arginine translocase subunit tata | DTM10_16015 | Not Available | Positive | 3145409 - 3145612 | 7024.71 |
| lipoyl synthase | DTM10_16020 | Not Available | Negative | 3145713 - 3146678 | 36073.8 |
| dna-binding protein | DTM10_16025 | Not Available | Negative | 3146777 - 3146890 | 4346.23 |
| dna-binding transcriptional regulator | DTM10_16030 | Not Available | Negative | 3146887 - 3147840 | 35881.4 |
| octanoyltransferase | DTM10_16040 | Not Available | Negative | 3148100 - 3148741 | 23900.0 |
| duf493 family protein | DTM10_16045 | Not Available | Negative | 3148842 - 3149105 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | DTM10_16050 | Not Available | Negative | 3149215 - 3150426 | 44446.5 |
Pathways
934 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





