Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | DTM10_15950 | Not Available | Negative | 3133942 - 3134493 | 20229.4 |
| citrate lyase alpha chain | DTM10_15955 | Not Available | Negative | 3134497 - 3136029 | 55210.0 |
| citrate lyase subunit beta | DTM10_15960 | Not Available | Negative | 3136040 - 3136948 | 33111.6 |
| citrate lyase acp | DTM10_15965 | Not Available | Negative | 3136945 - 3137241 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | DTM10_15970 | Not Available | Negative | 3137256 - 3138314 | 40012.3 |
| sensor histidine kinase dpib | DTM10_15975 | Not Available | Positive | 3138693 - 3140351 | 61625.6 |
| response regulator | DTM10_15980 | Not Available | Positive | 3140320 - 3141000 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | DTM10_15985 | Not Available | Negative | 3141041 - 3142426 | 48415.3 |
| c4-dicarboxylate abc transporter | DTM10_15990 | Not Available | Negative | 3142410 - 3142529 | 4615.7 |
| phospholipid:lipid a palmitoyltransferase | DTM10_15995 | Not Available | Positive | 3143015 - 3143575 | 21771.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





