Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DTM10_15900 | Not Available | Negative | 3124584 - 3125486 | 34247.7 |
| thiol:disulfide interchange protein dsbg | DTM10_15905 | Not Available | Negative | 3125692 - 3126438 | 27499.6 |
| alkyl hydroperoxide reductase subunit c | DTM10_15910 | Not Available | Positive | 3126810 - 3127373 | 20762.5 |
| alkyl hydroperoxide reductase subunit f | DTM10_15915 | Not Available | Positive | 3127544 - 3129109 | 56180.4 |
| universal stress protein uspg | DTM10_15920 | Not Available | Negative | 3129230 - 3129658 | 16008.2 |
| nucleoside diphosphate kinase regulator | DTM10_15925 | Not Available | Negative | 3130015 - 3130425 | 14928.0 |
| hypothetical protein | DTM10_15930 | Not Available | Positive | 3130413 - 3130598 | 7044.48 |
| ribonuclease i | DTM10_15935 | Not Available | Negative | 3130655 - 3131461 | 29605.1 |
| anion permease | DTM10_15940 | Not Available | Negative | 3131575 - 3133038 | 53151.7 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | DTM10_15945 | Not Available | Negative | 3133089 - 3133967 | 31639.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





