Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein nlpa | DTM10_15745 | Not Available | Positive | 3092512 - 3093330 | 29443.2 |
| dmt family transporter | DTM10_15750 | Not Available | Negative | 3093334 - 3094257 | 33093.4 |
| pas-pac-pac sensing his kinase | DTM10_15755 | Not Available | Negative | 3094424 - 3094696 | 10187.0 |
| hypothetical protein | DTM10_15760 | Not Available | Negative | 3095062 - 3095283 | 8553.38 |
| duf4942 domain-containing protein | DTM10_15765 | Not Available | Negative | 3095514 - 3096359 | 32663.3 |
| duf957 domain-containing protein | DTM10_15770 | Not Available | Negative | 3096444 - 3096641 | 7418.7 |
| hypothetical protein | DTM10_15775 | Not Available | Negative | 3096653 - 3097141 | 17956.3 |
| toxin | DTM10_15780 | Not Available | Negative | 3097138 - 3097515 | 13964.8 |
| hok/gef family protein | DTM10_15785 | Not Available | Positive | 3097597 - 3097673 | 2843.46 |
| enterobactin synthase subunit entd | DTM10_15790 | Not Available | Negative | 3097795 - 3098415 | 23298.0 |
Pathways
865 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





