Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DTM10_15695 | Not Available | Positive | 3081660 - 3082250 | 20890.6 |
| signal transduction histidine-protein kinase/phosphatase uhpb | DTM10_15700 | Not Available | Positive | 3082250 - 3083752 | 56349.3 |
| mfs transporter family glucose-6-phosphate receptor uhpc | DTM10_15705 | Not Available | Positive | 3083762 - 3085081 | 48235.3 |
| hexose phosphate transporter | DTM10_15710 | Not Available | Positive | 3085337 - 3086728 | 50609.6 |
| adenine deaminase | DTM10_15715 | Not Available | Negative | 3086775 - 3088541 | 63836.2 |
| ncs2 family permease | DTM10_15720 | Not Available | Positive | 3088716 - 3090050 | 46986.6 |
| duf1198 domain-containing protein | DTM10_15725 | Not Available | Positive | 3090103 - 3090555 | 17220.1 |
| hypothetical protein | DTM10_15730 | Not Available | Negative | 3090576 - 3090767 | 7006.7 |
| purine ribonucleoside efflux pump nepi | DTM10_15735 | Not Available | Positive | 3090766 - 3091956 | 41847.5 |
| hypothetical protein | DTM10_15740 | Not Available | Negative | 3091997 - 3092290 | 11061.4 |
Pathways
607 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





