Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | DTM10_15545 | Not Available | Positive | 3056189 - 3058603 | 89982.1 |
| duf937 domain-containing protein | DTM10_15550 | Not Available | Positive | 3058834 - 3059241 | 14141.0 |
| sugar phosphatase yida | DTM10_15555 | Not Available | Positive | 3059356 - 3060168 | 29722.8 |
| hypothetical protein | DTM10_15560 | Not Available | Negative | 3060212 - 3060868 | 24107.8 |
| transcriptional regulator | DTM10_15565 | Not Available | Positive | 3061145 - 3061834 | 26081.1 |
| 2-oxo-3-deoxygalactonate kinase | DTM10_15570 | Not Available | Positive | 3061831 - 3062709 | 31390.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DTM10_15575 | Not Available | Positive | 3062693 - 3063310 | 21417.8 |
| d-galactonate dehydratase 2 | DTM10_15580 | Not Available | Positive | 3063307 - 3064455 | 42525.3 |
| mfs transporter | DTM10_15585 | Not Available | Positive | 3064575 - 3065867 | 47093.5 |
| fad-binding protein | DTM10_15590 | Not Available | Negative | 3065828 - 3066928 | 41539.2 |
Pathways
301 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





