Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanase leader peptide | DTM10_15495 | Not Available | Negative | 3047800 - 3047874 | 2894.56 |
| trna uridine(34) 5-carboxymethylaminomethyl synthesis gtpase mnme | DTM10_15500 | Not Available | Negative | 3048116 - 3049480 | 49233.8 |
| membrane protein insertase yidc | DTM10_15505 | Not Available | Negative | 3049586 - 3051232 | 61543.5 |
| membrane protein insertion efficiency factor yidd | DTM10_15510 | Not Available | Negative | 3051235 - 3051492 | 9381.61 |
| ribonuclease p protein component | DTM10_15515 | Not Available | Negative | 3051456 - 3051815 | 13790.0 |
| 50s ribosomal protein l34 | DTM10_15520 | Not Available | Negative | 3051832 - 3051972 | 5380.74 |
| hypothetical protein | DTM10_15525 | Not Available | Positive | 3052085 - 3052285 | 7436.9 |
| chromosomal replication initiator protein dnaa | DTM10_15530 | Not Available | Positive | 3052579 - 3053982 | 52553.7 |
| dna polymerase iii subunit beta | DTM10_15535 | Not Available | Positive | 3053987 - 3055087 | 40589.1 |
| dna replication/repair protein recf | DTM10_15540 | Not Available | Positive | 3055087 - 3056160 | 40516.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





