Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AVC154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1373421 bp
Thymine Count
1371542 bp
Guanine Count
1390224 bp
Cytosine Count
1384564 bp
Genome Length
5520112 bp
Protein-coding Genes
5254 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atpase | DTM10_15195 | Not Available | Negative | 2982127 - 2983719 | 59843.4 |
| transpeptidase | DTM10_15200 | Not Available | Positive | 2983938 - 2984858 | 33327.2 |
| anion transporter | DTM10_15205 | Not Available | Negative | 2984917 - 2986035 | 41181.3 |
| transcriptional regulator mntr | DTM10_15210 | Not Available | Negative | 2986032 - 2986499 | 17641.3 |
| manganase accumulation protein mnts | DTM10_15215 | Not Available | Positive | 2986685 - 2986813 | 5031.31 |
| phosphoethanolamine transferase | DTM10_15220 | Not Available | Positive | 2987085 - 2988668 | 59670.3 |
| outer membrane protein x | DTM10_15225 | Not Available | Negative | 2988717 - 2989232 | 18603.6 |
| hypothetical protein | DTM10_15230 | Not Available | Positive | 2989827 - 2989893 | 2169.58 |
| fadr family transcriptional regulator | DTM10_15235 | Not Available | Positive | 2990336 - 2991028 | 26135.7 |
| mfs transporter | DTM10_15240 | Not Available | Positive | 2991051 - 2992478 | 51541.0 |
Pathways
846 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





